Insertion junction: CLIP2.044233_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044233
Chromosome:chromosome 17
Location:3721066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726150 (1 of 1) PTHR23073:SF29 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGGCATCCGCTCGCCACCTTACAGGACTTCAGCTAGCCGCAAGCTAC
Internal bar code:GGAATCCTCTTCTTAACCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCAAGCCCCAAGCCTAA
Suggested primer 2:TCCTGGATCACAACCACACG