Insertion junction: CLIP2.044238_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044238
Chromosome:chromosome 3
Location:8618967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210401 (1 of 1) PTHR14614//PTHR14614:SF15 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGATGCCCCAGGGCGCCGTCCGCAGGGTTATATACTTGTGTGTTGTG
Internal bar code:AGTTAGGAAGCTGCCCGAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4340
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGAGCCACGAGGGAACA
Suggested primer 2:ACTTAGTGGGCGGGATTTGG