Insertion junction: CLIP2.044268_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044268
Chromosome:chromosome 5
Location:2577973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTACGGTATGCCATCATGCGCACCTGCAGCTGTGCCAGGCGCGCGCTC
Internal bar code:CGTATATCAGCGAATGCTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1572
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTTGACCACGCACTTG
Suggested primer 2:ATGCATGTGTGTGTGTGTGC