Insertion junction: CLIP2.044280_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044280
Chromosome:chromosome 12
Location:8817514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546800 PHC53 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTAAAACGAAAGTGGCAGGCGGGTGGGCGCGTGGCAACGGGAGGTA
Internal bar code:TTTTAAAGCGAGGGCCTCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3443
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGGTTGCGATGGTACTT
Suggested primer 2:CGCTGACGCTGATAAAACCG