Insertion junction: CLIP2.044302_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044302
Chromosome:chromosome 12
Location:9561271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539900 (1 of 1) K00166 - 2-oxoisovalerate dehydrogenase E1 component alpha subunit (BCKDHA, bkdA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCGGCTCACCATGTCCTGCCCCCCCAGCCCCGCCGCCGAGCCGATGT
Internal bar code:GGGTTTTATCCTCCGTTGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:73
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGACCATGGACACCAT
Suggested primer 2:CACCTGGTTAGCGAACTGGT