Insertion junction: CLIP2.044302_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044302
Chromosome:chromosome 12
Location:9561292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539900 (1 of 1) K00166 - 2-oxoisovalerate dehydrogenase E1 component alpha subunit (BCKDHA, bkdA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGCCTAATGAAACAGGGTCCAGTTGTCTAGGCTTCATCGGCCAACC
Internal bar code:GGGTTTTATCCTCCGTTGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGGTTAGCGAACTGGT
Suggested primer 2:CTGCAGACCATGGACACCAT