Insertion junction: CLIP2.044303_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044303
Chromosome:chromosome 4
Location:2315026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220768 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACGCAGCAGCACCGCCGCCAGTGGCAAGTGCAGCAACAGCAGCAGCA
Internal bar code:CTAGCCTTAAGCGCTTTCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1523
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTGCTTTCATCACCGCT
Suggested primer 2:AACTTAGCAACCTCGTCCGG