Insertion junction: CLIP2.044304_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044304
Chromosome:chromosome 15
Location:1617422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750547 NDA2 thylakoid NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGTTGCTGAGTTGTAAGCTCTACCCAACCTGGTCAAGGACGCGGGT
Internal bar code:GCAGTATGTGGCATGGCATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:195
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTGTTGAGGACCAGCTT
Suggested primer 2:TAAGGTGGGAGGAGGGATGG