Insertion junction: CLIP2.044306_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044306
Chromosome:chromosome 7
Location:3593684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800817 (1 of 14) PF13371 - Tetratricopeptide repeat (TPR_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACGGTTGAGGGGGAAAAAGGAATGCGCTGCGTTGTGCTGGGTACACG
Internal bar code:GTTCAGCATGCAGCAGATAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGCGCAAATGGAGAAGC
Suggested primer 2:TTGTGGCATGGGCATTTGTG