Insertion junction: CLIP2.044313_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044313
Chromosome:chromosome 13
Location:2444511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACGAATGTAACACCCCTGACAGGCGCAAGCTGATTGAGGAGGAGGAG
Internal bar code:CAACTGCTGAGCCCTAAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGCACCTGTATCTTGTT
Suggested primer 2:CTACCCAACCACACAGCCAT