Insertion junction: CLIP2.044318_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044318
Chromosome:chromosome 14
Location:3113636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628450 CYN48,CYN1b,CYN1 Cyclophilin 48; (1 of 2) IPR002130//IPR029000 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain // Cyclophilin-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCGTGAAGGCTGCAGCCCACGAGCGCTAGTACGAGGACAATAGTG
Internal bar code:CACGTAATGGGAATACATGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1753
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGTTGACGTTCCTGGTG
Suggested primer 2:TAAACTGTGAGGCGCATGGT