Insertion junction: CLIP2.044318_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044318
Chromosome:chromosome 14
Location:3113788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628450 CYN48,CYN1b,CYN1 Cyclophilin 48; (1 of 2) IPR002130//IPR029000 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain // Cyclophilin-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTCTTGCCGCGACCGGCATGTCCGTTGCAGAGGTAACGCTGGCAGCA
Internal bar code:CACGTAATGGGAATACATGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4489
LEAP-Seq percent confirming:98.8235
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACTGTGAGGCGCATGGT
Suggested primer 2:TCGAGTTGACGTTCCTGGTG