Insertion junction: CLIP2.044328_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044328
Chromosome:chromosome 17
Location:3916365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727850 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGGGCGAGGAGGCGGCAGCGGCGGAGCTTGCTGAGTGGGGCGAGCAG
Internal bar code:GAGCATTGAAAGATAACATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1072
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACTCCTGCTCGTACTGC
Suggested primer 2:GCTGGATGCAGAGGAGGATC