Insertion junction: CLIP2.044330_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044330
Chromosome:chromosome 13
Location:838040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567250 (1 of 2) IPR007087//IPR015880 - Zinc finger, C2H2 // Zinc finger, C2H2-like intron
Cre13.g567300 (1 of 1) PTHR18968//PTHR18968:SF86 - THIAMINE PYROPHOSPHATE ENZYMES // SUBFAMILY NOT NAMED 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACTTGCCCCTTGCCTCTGCCTCTTGGTCCCCGTTCCACCTGGGCCGG
Internal bar code:TAGTCGTACACTGATGTTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:215
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCACTCTCATGACCC
Suggested primer 2:GGCGTGTCGAATTCAAGCTC