Insertion junction: CLIP2.044334_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044334
Chromosome:chromosome 9
Location:3036239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393691 KDG4 (1 of 1) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase; Diacylglycerol/ceramide/sphingosine kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCAGCCAGGGGCGCGGGCGCGGCGTGCGTGGCGGCGGTGGCGTGAA
Internal bar code:CCCGATGTTAGTCTGAACAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:283
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGATGTCGGGTCATGGG
Suggested primer 2:ACAGCGGGAAGATGAACAGG