Insertion junction: CLIP2.044337_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044337
Chromosome:chromosome 3
Location:3836331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170150 (1 of 2) PTHR10857//PTHR10857:SF0 - COPINE // PROTEIN GEM-4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTCAGCTCCACCCAACCCAGCGGCCGGTGAGACCCGTTTGACTCGTA
Internal bar code:CGCGCGGAAGAGGGACTGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2154
LEAP-Seq percent confirming:93.1507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCGCATACCTGCTACTG
Suggested primer 2:GCAGACAGACCCTCAGACAC