Insertion junction: CLIP2.044340_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044340
Chromosome:chromosome 17
Location:3533750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724650 (1 of 9) PTHR13789//PTHR13789:SF186 - MONOOXYGENASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAACAGCGCTTGCAAGTCACTCAGGAAAACGTATTACTACCATCATGG
Internal bar code:CGTAGGCGGCGAAAAACTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1738
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTCCAAAACCACGCCTG
Suggested primer 2:ATCTTTGCATGGGGACTGGG