Insertion junction: CLIP2.044350_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044350
Chromosome:chromosome 12
Location:3833180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514950 CGLD17,HEL53 (1 of 1) PTHR12873//PTHR12873:SF0 - T7-LIKE MITOCHONDRIAL DNA HELICASE // TWINKLE PROTEIN, MITOCHONDRIAL; Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTCGGGCTTGTCCACAAACTGGCCGTCCCTCTCCACCTGCACCCGCC
Internal bar code:CGATACGAAGGTTTTGCATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTGCCAAGAAGAAGTC
Suggested primer 2:GCGGCGTCGACAAGAAATAC