Insertion junction: CLIP2.044357_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044357
Chromosome:chromosome 5
Location:503271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244200 TMA1,COTH2 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGACCTCAGCGGTGAGCCGTGATACCGTTGTAATGTAATGCGGCAAAA
Internal bar code:GTGAGAACAAGGATGCCCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:810
LEAP-Seq percent confirming:18.9873
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGGGAATGTGTGCATG
Suggested primer 2:AAGATTTCCGACCCGTCACC