Insertion junction: CLIP2.044358_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044358
Chromosome:chromosome 6
Location:5002920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281650 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCACATCCGCTATGGTTGCGGAAGAACCCATGGTCATAGTTATGTGGT
Internal bar code:TACATGACTGTAGTTAGCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1094
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TATCTCGCAAGGGTCTGGGA
Suggested primer 2:CGGTGGTTATGAGGCTGGTT