Insertion junction: CLIP2.044364_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044364
Chromosome:chromosome 9
Location:2290229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394600 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCTCATCCTCATGGCCCTCATATTCTGAACTATCATCATTAGAGTCC
Internal bar code:TCTAAAAAGTCACCAATTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4393
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACGGTTCGTCGCTATC
Suggested primer 2:AGTGACTCAAAACCGCGCTA