Insertion junction: CLIP2.044367_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044367
Chromosome:chromosome 11
Location:1420794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469650 (1 of 11) PF07173 - Protein of unknown function (DUF1399) (DUF1399) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCATCCAGGTGTGCAGCAGCCGCGAAAAGTGGACCATGGCGTTGGC
Internal bar code:CCTAGTGCGCGCCAGGCTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1265
LEAP-Seq percent confirming:85.3659
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGAGCGCTACTGGACCG
Suggested primer 2:CCTTTTGCAGGCGTCTGAAC