Insertion junction: CLIP2.044380_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044380
Chromosome:chromosome 17
Location:5335444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802114 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTGCACCGTCGGGAGGGTAGAGTGAGTGCGTCCCACTGAGCCCAAGA
Internal bar code:TAGTATTAGGCGTGTACCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4166
LEAP-Seq percent confirming:76.087
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGTACGTGGACGAGTT
Suggested primer 2:CAGCACAGTTGTCAACAGCC