Insertion junction: CLIP2.044391_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044391
Chromosome:chromosome 16
Location:7544212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683147 (1 of 44) IPR000048 - IQ motif, EF-hand binding site 5'UTR
Cre16.g683259 MCP29 (1 of 1) PTHR24089:SF270 - SOLUTE CARRIER FAMILY 25 MEMBER 48; Mitochondrial substrate carrier protein outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGTCCTGATGCTTTTTATAGGCTTGAGTATGTGACTTTTATCAATT
Internal bar code:ATACGCATACTATTAGATTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1923
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGACTGTACTGAAGCG
Suggested primer 2:GCTTTGGGGATGTCACGAGA