Insertion junction: CLIP2.044393_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044393
Chromosome:chromosome 13
Location:1220279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570250 CKIN1L,SNRK1B,CKIN2 (1 of 1) PF07714//PF14531 - Protein tyrosine kinase (Pkinase_Tyr) // Kinase-like (Kinase-like); snRK1 family in Chlamydomonas, subgroup 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTTGACGGCCAGCTATTTCTTGCTGTGCGAGTCCAAGGCTGACGCG
Internal bar code:GTAGGGTCGAGTCCAAGATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2580
LEAP-Seq percent confirming:98.7952
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAAAACCATGCGCGACA
Suggested primer 2:CTTGTCATCCCCTTCCCACC