Insertion junction: CLIP2.044401_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044401
Chromosome:chromosome 2
Location:310593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075050 PTA1 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain; Proton/phosphate symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGTCAGTGAACGCACGTGTGCAAGGAGCTCGAGAAGGGAGATTAGA
Internal bar code:TCCTAAGAAGGGCAATGCACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2656
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGACATGTGTGTGCAAGCAA
Suggested primer 2:GTAAGAATACTCCCCGCCCG