Insertion junction: CLIP2.044409_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044409
Chromosome:chromosome 5
Location:2389889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238374 (1 of 1) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCTGTGTACGGCAGTGACGACGATGACGACGCGCTGCTTGGCGGCCC
Internal bar code:TCGGCAAGCCGGATAATCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:599
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCTGTTGTTGGAGTGC
Suggested primer 2:TGGAATGGGGCTTTGAGGAC