Insertion junction: CLIP2.044412_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044412
Chromosome:chromosome 17
Location:4589991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732100 SSA4 cilia-sensing, structure and/or assembly; (1 of 1) PTHR21439//PTHR21439:SF0 - OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN // PROTEIN OSCP1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAAAGCAACCAAGACCCGGGGGGTTGGCTGGGCGGCATGGACCACCCT
Internal bar code:CGGTTATCCTTCTCGGTTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:344
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGCCAGCGCTCTATGTC
Suggested primer 2:GGCAATGGCAGACAATAGCG