Insertion junction: CLIP2.044418_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044418
Chromosome:contig 41
Location:7566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre41.g802226 (1 of 20) IPR008972 - Cupredoxin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACACGCCGGTAGTCGAGAGGGCATCAAACACGTTCCGTTTGGCAGCCA
Internal bar code:TTAATTGTTAGATCGACTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:113
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTCTCCCACTCCCAAAC
Suggested primer 2:TCAGGTGATGGGTGACAACG