Insertion junction: CLIP2.044423_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044423
Chromosome:chromosome 9
Location:3082459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394028 (1 of 21) IPR000679 - Zinc finger, GATA-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACGGCAGCGTGATGAATAAAGTGCTGCGGCGAGGTACGGGGACATAC
Internal bar code:AAGGGGGGCATCCTGTCGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2288
LEAP-Seq percent confirming:95.0495
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTGGCCCACGCAAAGTC
Suggested primer 2:GGCTGTTGACAACTGTGCTG