Insertion junction: CLIP2.044431_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044431
Chromosome:chromosome 1
Location:2136331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800038 (1 of 3) IPR000953//IPR016197 - Chromo/chromo shadow domain // Chromo domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCAGGAGGCGGCTGACATGGTGGCTGCGGACGCCGAGGCCGAGGCTG
Internal bar code:TTCGCTGGGTATTATCCGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4511
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCACCTCGTCCATGAT
Suggested primer 2:CCTCCGAATACCAGCTCGAC