Insertion junction: CLIP2.044439_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044439
Chromosome:chromosome 10
Location:6376354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464200 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCACACAAACGCAACCCTCCCTCCCTCACACACACCACACAACCC
Internal bar code:AAGCATAATAGGTTCGAGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:546
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGGCAATGTCGTCAGCAT
Suggested primer 2:GTACGACACAATCATCGCGC