Insertion junction: CLIP2.044444_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044444
Chromosome:chromosome 5
Location:2265532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238052 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACGTGCTGAGCCCCTTCCTGCTGCTGCCCATCGCAGCCGCCAGCAG
Internal bar code:GGGGTGTCCTTAAGGGGAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4279
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCTTCCATCTGCTCCAC
Suggested primer 2:CCAAAACCAACATGCTCCGG