Insertion junction: CLIP2.044445_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044445
Chromosome:chromosome 17
Location:5544463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739550 CPLD12 Conserved in the Plant Lineage and Diatoms; (1 of 11) 2.7.4.3 - Adenylate kinase / Myokinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGCGAGTGTTAAAAAAACGAA
Internal bar code:GCGTCAGTAGTTGGACGTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:740
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGAAACGACGGTTCATC
Suggested primer 2:TCGCGAGCATCCAATCTCTC