Insertion junction: CLIP2.044453_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044453
Chromosome:chromosome 17
Location:167948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697000 (1 of 2) PTHR23155:SF401 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCAAGCCCTTCGTGTCGCGTCCCTCGCTTTGCTGCTGTGCACCTCAG
Internal bar code:TTTTGAATATTGGATAGTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:51.3514
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGGACATGTAGCGGTGA
Suggested primer 2:ACTTGCACGTAACGTCGACT