Insertion junction: CLIP2.044456_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044456
Chromosome:chromosome 3
Location:2098323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATTTGAAGCCGCAAGAAGCTCCAACCATGACTTCTTCCTGTGCTGTT
Internal bar code:ACGGCGATTCACTTGGAGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1700
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCGCGGTTTGCAAAGTG
Suggested primer 2:TTCCTGGCATCTTCCTGCTG