Insertion junction: CLIP2.044459_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044459
Chromosome:chromosome 16
Location:6174625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTGTGTGTGTCAAAAGGGAAAGGAAGGGTGTGCACCACCAGGTACGT
Internal bar code:GACTCGGGAAGAACACCGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3673
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGGTGTTTACGTGTGCT
Suggested primer 2:GCTGTTCCCACTTGGCAAAG