Insertion junction: CLIP2.044465_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044465
Chromosome:chromosome 6
Location:7744450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302900 (1 of 1) PTHR23180//PTHR23180:SF203 - CENTAURIN/ARF // CENTAURIN BETA 1A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCATGTTCCTGCAGCGTTGCTTTAACTGCGACTCGCTGGGCTGCGCG
Internal bar code:TTCTGTGTTACTTCCGGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACGCTTCACTTTCAGCA
Suggested primer 2:CTAGAAGGTGGTGTTGGCGT