Insertion junction: CLIP2.044465_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044465
Chromosome:chromosome 6
Location:7744450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302900 (1 of 1) PTHR23180//PTHR23180:SF203 - CENTAURIN/ARF // CENTAURIN BETA 1A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGCTTAGCGGACGGTGCTATCGAAAGGGCGCTCGCCCATGACAACC
Internal bar code:TTCTGTGTTACTTCCGGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGAAGGTGGTGTTGGCGT
Suggested primer 2:GCAACGCTTCACTTTCAGCA