Insertion junction: CLIP2.044491_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044491
Chromosome:chromosome 13
Location:4469357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602750 (1 of 5) PTHR32467:SF15 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCAGGCCTTTTCCCGCGCCTGGGCTGTGTGTGCAGCTTCTGGGCTGC
Internal bar code:GCACGTGATGCCCTCGCTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3717
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCAGGCAACAGCAGTCC
Suggested primer 2:GGTGTGTGTGTGTGTGTGTG