Insertion junction: CLIP2.044496_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044496
Chromosome:chromosome 6
Location:6348279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293051 AMT1C,AMT3 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATGCTTGGAAGCTGCAGCTACCCACATGCTACACTAACCTCCGCAAG
Internal bar code:AAGGTTGTTCAACTATGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6424
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTGCTGCTGGGGATGAA
Suggested primer 2:GGGAACAAGGTCAGATGGGG