Insertion junction: CLIP2.044498_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044498
Chromosome:chromosome 4
Location:1622762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213000 MAE12 (1 of 5) PTHR11206:SF94 - DNA-DAMAGE-INDUCIBLE PROTEIN F; MATE efflux family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGCAGTGGTGGCTAGGGACACGGCGCTCAGCTGCAGCGTGCCCAGGT
Internal bar code:TTTCATGTTTGCTAAGGTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1032
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGCGTATGCAACAATGAG
Suggested primer 2:AGTGGCATGCAGTTGACAGA