Insertion junction: CLIP2.044501_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044501
Chromosome:chromosome 4
Location:1279607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800460 (1 of 37) IPR009000 - Translation protein, beta-barrel domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGTCCAAATACACGCCCTCGACAATTCTCTAGACAACGCCAACACGC
Internal bar code:CTTGGGAACATTGTCCTGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGAACGTAACGTCTCCA
Suggested primer 2:GGGAGGGTGGTGTGTACATG