Insertion junction: CLIP2.044504_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044504
Chromosome:chromosome 9
Location:2877756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390678 (1 of 1) K17500 - integrin-linked kinase-associated serine/threonine phosphatase 2C [EC:3.1.3.16] (ILKAP) intron
Cre09.g801025 intron
lncRNA_TCONS_00128634 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCGCACCCGCTACCAGCGAACTGCCTGCCCCCCGCGCCCGCCCCCTC
Internal bar code:CTTATATGATTTACACGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1287
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAACTCCTCCGCACACA
Suggested primer 2:GCACTCCTCCGCACTCTATC