Insertion junction: CLIP2.044506_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044506
Chromosome:chromosome 8
Location:3906285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800952 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCAGCCGCTCCGGCTGCTGCTGCTCTGGCGGTTGCAGCTGCTGCG
Internal bar code:CTGTGAAAATCCTACGCCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTACGCGGATGATGAGG
Suggested primer 2:CACATCACCTCCCATGCTGT