Insertion junction: CLIP2.044511_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044511
Chromosome:chromosome 3
Location:661181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145667 (1 of 1) PTHR13060//PTHR13060:SF0 - SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 // PROTEIN SGT1 intron
Cre03.g145687 RAD2 (1 of 1) K04799 - flap endonuclease-1 (FEN1, RAD2); DNA repair protein, XPGC/Rad2 homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAAATGGAGCAGGGTCTGCCAATGCAGCCTGCCCGTGTTGATGTGCA
Internal bar code:GGGTTTGACAAGCATGGTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2835
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCCTACCGTGCATAGGC
Suggested primer 2:TATGCCAGAGTCGTCATCGC