Insertion junction: CLIP2.044528_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044528
Chromosome:chromosome 13
Location:2744636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTGTCTACTATGGCGTCAAAGTGCTGCTGCAGCTCCGACAGCGTACA
Internal bar code:GGCCAGGTGTAGACTGGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3544
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGACGCCAGATATCAT
Suggested primer 2:ATAACGCAGCTGCAGGTCTT