Insertion junction: CLIP2.044530_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044530
Chromosome:chromosome 10
Location:1521844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428734 (1 of 2) IPR000104//IPR000945 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCATCATGTCTCAGGTCTCAACGACCCAACCCAGATCCCACGGAAGC
Internal bar code:TTATGACTTAGGTCGTCACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3414
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCCTGCTTTTGGTGTC
Suggested primer 2:GCGATTTCTGCATCGGCTTT