Insertion junction: CLIP2.044550_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044550
Chromosome:chromosome 12
Location:4124273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517100 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCAGGGGTGATGAGCGGCGGCCGCCTGAGGGTTTGCGTGTGGGTC
Internal bar code:AGGTATAAGACGTTAATTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1693
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCAGAGACGCTGTGTC
Suggested primer 2:CCACAGTCCATCAAGCCCAT