Insertion junction: CLIP2.044551_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044551
Chromosome:chromosome 13
Location:1899233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575776 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTATCGACAACGCTTGCGGGAACCGGTTGCTGTATTAAAACTGGTTACT
Internal bar code:GGGCACAGAATAAATGTGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1793
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCCTCAACAACATCCC
Suggested primer 2:ACGGAAGTAACAGCAGGCTC